Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs76980177 chr5:180124706 T/C 0 117 46.43 30.27 4.13 KM Plot
THYM rs77042210 chr4:70062094 C/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs77076284 chr4:70086335 G/A 6.0E-13 118 41.22 35 6 KM Plot
THYM rs77079843 chr8:2643788 G/T 1.77E-8 115 46.27 26 12.63 KM Plot
THYM rs77101014 chr4:70289403 A/T 6.15E-13 118 41.77 42.3 6 KM Plot
THYM rs77122684 chr4:70106173 ATC/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs77208978 chr4:115551044 A/G 0 118 38.23 46.27 4.13 KM Plot
THYM rs77235961 chr4:70065928 A/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs77245514 chr11:122799998 T/C 1.53E-8 114 42.25 35 12.63 KM Plot
THYM rs77255042 chr4:70123285 T/A 4.7E-13 119 41.77 35 6 KM Plot
THYM rs77256965 chr19:35908257 G/A 1.15E-8 119 40.67 42.9 12.63 KM Plot
THYM rs77305820 chr4:115553981 C/T 0 118 38.23 46.27 4.13 KM Plot
THYM rs7731780 chr5:180120192 G/T 0 118 46.27 30.27 4.13 KM Plot
THYM rs77331739 chr4:70086148 G/A 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs77353975 chr4:70068508 G/C 5.73E-13 118 39.75 49.6 6 KM Plot